CDS

Accession Number TCMCG010C13796
gbkey CDS
Protein Id XP_016566197.1
Location join(246362345..246362448,246364630..246364774,246366057..246366131,246366518..246366607,246366853..246366932,246368648..246368717,246368832..246368917,246370574..246370634,246370856..246370951,246371121..246371220,246371376..246371422,246371498..246371581,246371682..246371735,246372352..246372452,246373038..246373128,246373784..246373948,246374617..246374706,246374797..246374868,246375278..246375376,246375476..246375562,246375728..246375781,246375922..246376001,246376614..246376761)
Gene LOC107864357
GeneID 107864357
Organism Capsicum annuum

Protein

Length 692aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319678
db_source XM_016710711.1
Definition PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 isoform X1 [Capsicum annuum]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA helicase
KEGG_TC -
KEGG_Module M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13117        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCACAATTTTGGAAACCAGGAAGTGAAAGGCCTCGACTTGTTGATGATGAAGAAGGTGGCGTTCTTCTCTACGCTACCTCTTCTTCCTCCTCTTCCTCAGGATTTGGGTATGGGAGTTTAGAGAAGCAAAGGCAAAGGCTGCCTGTGTACAAGTACAAAACTGCTATTCTTTACTCAGTGGAGACTCATGCTACTACCATTATTGTTGGAGAAACTGGAAGTGGAAAAACCACCCAAATTCCTCAGTACCTGAAAGAAGCTGGTTGGGCTGAGGGAGGGCGCATGATAGCTTGCACTCAACCAAGGAGACTGGCCGTCCAGGCAGTTGCTACAAGAGTTGCCGAAGAAATGGATGTTAAACTTGGTGAGGAAGTTGGTTATACTATTCGATTTGAAGATATCACGAATGAGGAATTAACTAGGGTCAAATTTCTTACTGATGGAGTTCTGCTGAGGGAAATGATGGATGATCCTCTGTTGAGTAAGTATAGTGTGATTATGGTAGATGAAGCTCATGAAAGGTCTCTCTCAACGGACATCTTATTGGGACTACTGAAAAAGATTCAAAGGCGTCGCCCTGAACTGCGTATTATAATATCATCAGCTACGATTGAAGCAAAATCAATGGCTGCTTTCTTTAATACCAGCAGAAGACGATGCGAGCAGGAGCAAGGACCAATTAAAGAACCTGCTATTCTGTCAGTTGAGGGTAGGGGATTTAATGTTGAGATATTTTATGTTGAAGATCCCGTTTCTGATTATGTTTGGGCCGCTGTTTCAACAGTGATGTCGATCCATGACCAGGAACGGATGGGAGATATTCTGGTGTTTCTCACTGGTCAAGATGATATTGATGCTGCAATACAGTTGCTTACTGAAGAAGCGCAAAGTAGTGGGAAGCAAGGACTGGTTACTGTGCCACTATACTCGGGACTTCCTCGAGCAGATCAGGACCTTGTGTTTTCCCCTACTCCCAAAGGAAAAAGAAAAGTGATATTTTCAACAAATATTGCTGAGACGTCGTTGACTCTAGAGGGTATTGTCTATGTTGTTGATAGCGGGTTCTCAAAACAACGTTTTTACAACCCGATTTCAGATATTGAGAATTTGGTAGTGGCACCAATATCAAAGGCATCTGCTCGACAAAGGGCTGGTAGAGCTGGAAGAGTTCGACCAGGAAAGTGTTTTAGGCTCTACACAGAAGATTATTTTTCCAAAGAGATGTCTGTGGTGGGAATCCCGGAGATACAGAGATCAAACCTCGTTTCCTGTGTCATCCAGTTGAAGGCCTTAGGAATCGATAATATCTTAGGTTTTGATTGGCCAGCATCCCCATCAGCTGAATCGATGATCAGAGCACTTGAAGTACTGTATTCTCTTGGAGTACTAGATGACGACGCCAAACTTACTTCACCTACTGGATTTCAAGTTGCCGAGATTCCACTGGACCCATTAATATCTAAAATGATATTGGCTTCTTATGAGTTTGGATGTTCTGAGGAAATAATTACCATTGCTGCTGTGCTCTCCATACAGTCTATTTGGATTCCTGTTAGAGGAGTACAGAAACAGTTGGATGAAGCAAAATTGAAATTCGCAGCTGCCGAGGGTGACCACGTCACATTCTTAAATGTGTATAAAGGATTCATTCAGTCTAACAAATCTTCAAAATGGTGTCACAAGAATTTTATAAATTATCATGCCATGAGAAAAGTAATTGAAGTTAGGGAACAGCTGAAAAGGATTACACAACGGTTGGGCATAGGATTGAAATCTTGTGAAGGGGATATTCAGGCAGTAAGGAAGGCAATTACGGCAGGGTTTTTTGCCAATGCTGCCCGTTTAGAACCATTCAGTCACAATGGGATGTACAAGACTGTCAGAACTTCTCAAGAAGTTTATATTCATCCTTCATCTGTGCTGTTCAGGGTCAACCCAAAGTTTATTGTGTACCATTCTCTTGTTTCAACTGATCGTCAGTACATGCGAAATGTCATTACTATCGATCCTTCTTGGCTAACGGAGGCTGCACCACATTTTTACCAGAAGCAGCTGCATAGTTCTGTTCCTCAATGA
Protein:  
MSQFWKPGSERPRLVDDEEGGVLLYATSSSSSSSGFGYGSLEKQRQRLPVYKYKTAILYSVETHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRMIACTQPRRLAVQAVATRVAEEMDVKLGEEVGYTIRFEDITNEELTRVKFLTDGVLLREMMDDPLLSKYSVIMVDEAHERSLSTDILLGLLKKIQRRRPELRIIISSATIEAKSMAAFFNTSRRRCEQEQGPIKEPAILSVEGRGFNVEIFYVEDPVSDYVWAAVSTVMSIHDQERMGDILVFLTGQDDIDAAIQLLTEEAQSSGKQGLVTVPLYSGLPRADQDLVFSPTPKGKRKVIFSTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCFRLYTEDYFSKEMSVVGIPEIQRSNLVSCVIQLKALGIDNILGFDWPASPSAESMIRALEVLYSLGVLDDDAKLTSPTGFQVAEIPLDPLISKMILASYEFGCSEEIITIAAVLSIQSIWIPVRGVQKQLDEAKLKFAAAEGDHVTFLNVYKGFIQSNKSSKWCHKNFINYHAMRKVIEVREQLKRITQRLGIGLKSCEGDIQAVRKAITAGFFANAARLEPFSHNGMYKTVRTSQEVYIHPSSVLFRVNPKFIVYHSLVSTDRQYMRNVITIDPSWLTEAAPHFYQKQLHSSVPQ